NeAT - compare-classes

Compare two classifications (clustering results, functional classes, ...), and assess the statistical significance of common members between each pair of classes.
This program was developed Jacques van Helden, with a contribution of Joseph Tran for a first prototype.
Query classesReference classes
Upload query classes from file :
Upload reference classes from file :
Score column (optional; if specified, must be valid for both query and reference classes)
Compare query classes to reference classes
Compare query classes to query classes (do not specify reference classes)
Output options
Class pairsReference/query matrix
Return fields
  


Thresholds Lower Upper
Query size
Reference size
Intersection size
Significance
P-value
E-value
Jaccard index
Mutual information
Dot product
(Only relevant if a score column is specified)

Intersection
Significance
Jaccard index
Dot product
E-value
P-value
Mutual information